Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.64■□□□□ 0.57
YJEFN3A6XGL0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 KRT18P31-201ENST00000506277 1292 ntBASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 KRT126P-201ENST00000549467 1181 ntBASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 AC011467.2-201ENST00000598425 242 ntBASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 AC114341.1-201ENST00000618070 349 ntBASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
YJEFN3A6XGL0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 UNC93B7-201ENST00000509439 705 ntBASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 AL121772.3-201ENST00000610840 674 ntBASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YJEFN3A6XGL0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 KRT16P4-201ENST00000453883 522 ntBASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 AC091304.2-201ENST00000564639 760 ntBASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 MIR5100-201ENST00000579544 119 ntBASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 AC116407.2-201ENST00000613639 860 ntBASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 AC012317.2-201ENST00000623305 2251 ntBASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 AC008764.6-201ENST00000595909 2069 ntBASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 INTS4P1-201ENST00000438455 1935 ntBASIC18.61■□□□□ 0.57
YJEFN3A6XGL0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YJEFN3A6XGL0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms