Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.01■□□□□ 0.15
TVP23AA6NH52 MIR3917-201ENST00000580971 93 ntBASIC16.01■□□□□ 0.15
TVP23AA6NH52 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.01■□□□□ 0.15
TVP23AA6NH52 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.01■□□□□ 0.15
TVP23AA6NH52 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TVP23AA6NH52 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TVP23AA6NH52 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TVP23AA6NH52 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
TVP23AA6NH52 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.01■□□□□ 0.15
TVP23AA6NH52 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TVP23AA6NH52 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.01■□□□□ 0.15
TVP23AA6NH52 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TVP23AA6NH52 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TVP23AA6NH52 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TVP23AA6NH52 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TVP23AA6NH52 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TVP23AA6NH52 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.01■□□□□ 0.15
TVP23AA6NH52 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TVP23AA6NH52 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TVP23AA6NH52 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.01■□□□□ 0.15
TVP23AA6NH52 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TVP23AA6NH52 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.01■□□□□ 0.15
TVP23AA6NH52 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TVP23AA6NH52 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TVP23AA6NH52 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16■□□□□ 0.15
TVP23AA6NH52 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 AC141586.5-201ENST00000624546 2050 ntBASIC16■□□□□ 0.15
TVP23AA6NH52 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TVP23AA6NH52 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16■□□□□ 0.15
TVP23AA6NH52 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TVP23AA6NH52 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16■□□□□ 0.15
TVP23AA6NH52 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16■□□□□ 0.15
TVP23AA6NH52 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16■□□□□ 0.15
TVP23AA6NH52 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16■□□□□ 0.15
TVP23AA6NH52 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16■□□□□ 0.15
TVP23AA6NH52 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 AL157888.1-201ENST00000631930 593 ntBASIC16■□□□□ 0.15
TVP23AA6NH52 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16■□□□□ 0.15
TVP23AA6NH52 AC092865.7-201ENST00000641832 219 ntBASIC16■□□□□ 0.15
TVP23AA6NH52 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 AL355312.1-201ENST00000407115 2176 ntBASIC16■□□□□ 0.15
TVP23AA6NH52 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16■□□□□ 0.15
TVP23AA6NH52 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TVP23AA6NH52 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16■□□□□ 0.15
TVP23AA6NH52 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TVP23AA6NH52 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 NFIC-211ENST00000641145 8399 ntBASIC15.99■□□□□ 0.15
TVP23AA6NH52 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TVP23AA6NH52 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TVP23AA6NH52 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TVP23AA6NH52 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 AL512604.3-201ENST00000569583 964 ntBASIC15.99■□□□□ 0.15
TVP23AA6NH52 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TVP23AA6NH52 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TVP23AA6NH52 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TVP23AA6NH52 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TVP23AA6NH52 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TVP23AA6NH52 LINC01568-207ENST00000641790 1380 ntBASIC15.99■□□□□ 0.15
TVP23AA6NH52 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TVP23AA6NH52 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.99■□□□□ 0.15
TVP23AA6NH52 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TVP23AA6NH52 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TVP23AA6NH52 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TVP23AA6NH52 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.98■□□□□ 0.15
TVP23AA6NH52 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms