Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC189A1A4V9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 AP000525.1-201ENST00000608286 694 ntBASIC17.94■□□□□ 0.46
CCDC189A1A4V9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC189A1A4V9 AC023824.1-201ENST00000562945 2975 ntBASIC17.94■□□□□ 0.46
CCDC189A1A4V9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 TMEM191A-211ENST00000637163 1067 ntBASIC17.93■□□□□ 0.46
CCDC189A1A4V9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC189A1A4V9 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms