Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 KRT17P2-201ENST00000300992 1314 ntBASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 AL157888.1-201ENST00000631930 593 ntBASIC18.02■□□□□ 0.48
TCRBV9S1A1TA0A576 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.02■□□□□ 0.47
TCRBV9S1A1TA0A576 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.02■□□□□ 0.47
TCRBV9S1A1TA0A576 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV9S1A1TA0A576 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV9S1A1TA0A576 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.02■□□□□ 0.47
TCRBV9S1A1TA0A576 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV9S1A1TA0A576 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV9S1A1TA0A576 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.02■□□□□ 0.47
TCRBV9S1A1TA0A576 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV9S1A1TA0A576 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 TSPY15P-201ENST00000457163 923 ntBASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 AL512604.3-201ENST00000569583 964 ntBASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 NKILA-202ENST00000614771 2598 ntBASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.01■□□□□ 0.47
TCRBV9S1A1TA0A576 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 AC011676.5-201ENST00000624864 2660 ntBASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 AC113404.2-201ENST00000507884 177 ntBASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 NAPSB-206ENST00000562112 1266 ntBASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 AC116407.2-201ENST00000613639 860 ntBASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV9S1A1TA0A576 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.99■□□□□ 0.47
TCRBV9S1A1TA0A576 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms