Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX11Q9Y5W9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNX11Q9Y5W9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
SNX11Q9Y5W9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.71■□□□□ 0.42
SNX11Q9Y5W9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNX11Q9Y5W9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SNX11Q9Y5W9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 AL356309.3-201ENST00000624132 1934 ntBASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 KRT18P65-201ENST00000439811 1286 ntBASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 AC092183.1-201ENST00000469884 875 ntBASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 AC092910.1-201ENST00000482027 1129 ntBASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 OR7E14P-202ENST00000530490 1290 ntBASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 AC145285.3-201ENST00000564603 959 ntBASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.7■□□□□ 0.42
SNX11Q9Y5W9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 HLA-J-201ENST00000462773 1622 ntBASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 AC012640.2-201ENST00000561606 901 ntBASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 AC126763.1-201ENST00000552015 2118 ntBASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX11Q9Y5W9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms