Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 KRT8P9-201ENST00000558927 1449 ntBASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 EGLN1P1-201ENST00000531623 762 ntBASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 CYP2D8P-201ENST00000433633 1490 ntBASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP2BQ9UQN3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 AL023806.1-201ENST00000603994 1649 ntBASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP2BQ9UQN3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 TSPY15P-201ENST00000457163 923 ntBASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP2BQ9UQN3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms