Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC074386.1-202ENST00000463561 864 ntBASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 AL805961.1-202ENST00000641562 540 ntBASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3H4Q9UPT8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 MRPL20P1-201ENST00000400819 433 ntBASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 AC109322.1-201ENST00000524499 1264 ntBASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 LINC00628-201ENST00000628516 1289 ntBASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 BX323043.1-201ENST00000641006 1765 ntBASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 AL121761.2-201ENST00000598007 1648 ntBASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZC3H4Q9UPT8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 AL020989.1-201ENST00000422979 469 ntBASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 TERF1P3-201ENST00000505638 1227 ntBASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 AL390955.2-201ENST00000603032 514 ntBASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 AC092902.6-201ENST00000641783 218 ntBASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 AC103564.2-201ENST00000432853 1299 ntBASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 AC022145.2-201ENST00000598203 171 ntBASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZC3H4Q9UPT8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 REXO1L3P-201ENST00000622202 1288 ntBASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 AC073592.5-201ENST00000624854 528 ntBASIC21.54■■□□□ 1.04
ZC3H4Q9UPT8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZC3H4Q9UPT8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms