Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 FAM86EP-206ENST00000510506 987 ntBASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 AC011498.5-201ENST00000592027 486 ntBASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 PCDHB18P-201ENST00000524813 2368 ntBASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.59■□□□□ 0.57
AP4E1Q9UPM8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP4E1Q9UPM8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP4E1Q9UPM8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP4E1Q9UPM8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP4E1Q9UPM8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
AP4E1Q9UPM8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
AP4E1Q9UPM8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
AP4E1Q9UPM8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.58■□□□□ 0.57
AP4E1Q9UPM8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 MTCL1P1-201ENST00000446207 792 ntBASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 AC068472.1-201ENST00000474589 881 ntBASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AP4E1Q9UPM8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 AC116407.2-201ENST00000613639 860 ntBASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4E1Q9UPM8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP4E1Q9UPM8 AC009949.1-201ENST00000623048 1830 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms