Protein–RNA interactions for Protein: Q9NZR2

LRP1B, Low-density lipoprotein receptor-related protein 1B, humanhuman

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1BQ9NZR2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 GK-202ENST00000378941 458 ntTSL 3 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 AC093214.1-201ENST00000511688 1107 ntBASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LRP1BQ9NZR2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 DUX4L27-201ENST00000554796 1261 ntBASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 PMS2P4-201ENST00000412466 1052 ntBASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 AC015922.1-201ENST00000421102 1152 ntBASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LRP1BQ9NZR2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LRP1BQ9NZR2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.6
LRP1BQ9NZR2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LRP1BQ9NZR2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC11.27□□□□□ -0.6
LRP1BQ9NZR2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC11.27□□□□□ -0.6
LRP1BQ9NZR2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LRP1BQ9NZR2 MRPS18AP1-201ENST00000414458 589 ntBASIC11.27□□□□□ -0.6
LRP1BQ9NZR2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.27□□□□□ -0.6
LRP1BQ9NZR2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.27□□□□□ -0.6
LRP1BQ9NZR2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.27□□□□□ -0.6
LRP1BQ9NZR2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.27□□□□□ -0.6
LRP1BQ9NZR2 MIR4751-201ENST00000578027 74 ntBASIC11.27□□□□□ -0.6
LRP1BQ9NZR2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
LRP1BQ9NZR2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LRP1BQ9NZR2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LRP1BQ9NZR2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LRP1BQ9NZR2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
LRP1BQ9NZR2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.27□□□□□ -0.61
LRP1BQ9NZR2 MRPL20P1-201ENST00000400819 433 ntBASIC11.27□□□□□ -0.61
LRP1BQ9NZR2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.27□□□□□ -0.61
LRP1BQ9NZR2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC11.27□□□□□ -0.61
LRP1BQ9NZR2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.27□□□□□ -0.61
LRP1BQ9NZR2 AC010654.1-201ENST00000615722 808 ntBASIC11.27□□□□□ -0.61
LRP1BQ9NZR2 PGM5P2-202ENST00000637225 1043 ntBASIC11.27□□□□□ -0.61
LRP1BQ9NZR2 AF228730.6-201ENST00000641497 218 ntBASIC11.27□□□□□ -0.61
LRP1BQ9NZR2 AC084121.3-201ENST00000641716 218 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms