Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AL138688.1-201ENST00000624851 1594 ntBASIC18.88■□□□□ 0.61
SMARCAL1Q9NZC9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SMARCAL1Q9NZC9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SMARCAL1Q9NZC9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.88■□□□□ 0.61
SMARCAL1Q9NZC9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCAL1Q9NZC9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCAL1Q9NZC9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCAL1Q9NZC9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMARCAL1Q9NZC9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 AC093827.2-201ENST00000512654 315 ntBASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 LINC00304-203ENST00000565008 1864 ntBASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 AC066615.1-201ENST00000640911 628 ntBASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMARCAL1Q9NZC9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 CA15P1-201ENST00000481698 905 ntBASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 AP003041.3-201ENST00000527151 707 ntBASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 MIR4785-201ENST00000585005 73 ntBASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SMARCAL1Q9NZC9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 AL118508.1-201ENST00000613502 2345 ntBASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SMARCAL1Q9NZC9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms