Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTA1Q9NP79 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VTA1Q9NP79 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 AC007967.2-201ENST00000432613 625 ntBASIC19.94■□□□□ 0.78
VTA1Q9NP79 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 AC092183.1-201ENST00000469884 875 ntBASIC19.94■□□□□ 0.78
VTA1Q9NP79 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 AL139424.1-201ENST00000607572 797 ntBASIC19.94■□□□□ 0.78
VTA1Q9NP79 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTA1Q9NP79 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTA1Q9NP79 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTA1Q9NP79 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTA1Q9NP79 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VTA1Q9NP79 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.94■□□□□ 0.78
VTA1Q9NP79 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VTA1Q9NP79 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.93■□□□□ 0.78
VTA1Q9NP79 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VTA1Q9NP79 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTA1Q9NP79 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTA1Q9NP79 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTA1Q9NP79 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.93■□□□□ 0.78
VTA1Q9NP79 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.93■□□□□ 0.78
VTA1Q9NP79 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.93■□□□□ 0.78
VTA1Q9NP79 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VTA1Q9NP79 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
VTA1Q9NP79 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTA1Q9NP79 YBX2P1-201ENST00000394192 760 ntBASIC19.93■□□□□ 0.78
VTA1Q9NP79 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VTA1Q9NP79 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
VTA1Q9NP79 DNAJB3-201ENST00000446806 729 ntBASIC19.93■□□□□ 0.78
VTA1Q9NP79 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
VTA1Q9NP79 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VTA1Q9NP79 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.93■□□□□ 0.78
VTA1Q9NP79 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.93■□□□□ 0.78
VTA1Q9NP79 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.93■□□□□ 0.78
VTA1Q9NP79 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VTA1Q9NP79 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
VTA1Q9NP79 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.93■□□□□ 0.78
VTA1Q9NP79 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VTA1Q9NP79 AC132938.5-201ENST00000624980 1813 ntBASIC19.92■□□□□ 0.78
VTA1Q9NP79 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.92■□□□□ 0.78
VTA1Q9NP79 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 RPSAP43-201ENST00000402237 625 ntBASIC19.92■□□□□ 0.78
VTA1Q9NP79 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.92■□□□□ 0.78
VTA1Q9NP79 GPX1P2-201ENST00000429271 606 ntBASIC19.92■□□□□ 0.78
VTA1Q9NP79 AC108751.1-201ENST00000490852 363 ntBASIC19.92■□□□□ 0.78
VTA1Q9NP79 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.92■□□□□ 0.78
VTA1Q9NP79 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.92■□□□□ 0.78
VTA1Q9NP79 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.92■□□□□ 0.78
VTA1Q9NP79 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.92■□□□□ 0.78
VTA1Q9NP79 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 AC010327.4-202ENST00000591484 748 ntBASIC19.92■□□□□ 0.78
VTA1Q9NP79 AC004706.3-202ENST00000621574 984 ntBASIC19.92■□□□□ 0.78
VTA1Q9NP79 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.92■□□□□ 0.78
VTA1Q9NP79 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VTA1Q9NP79 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VTA1Q9NP79 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VTA1Q9NP79 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VTA1Q9NP79 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VTA1Q9NP79 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
VTA1Q9NP79 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VTA1Q9NP79 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VTA1Q9NP79 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
VTA1Q9NP79 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.91■□□□□ 0.78
VTA1Q9NP79 AC003669.1-201ENST00000334569 611 ntBASIC19.91■□□□□ 0.78
VTA1Q9NP79 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.91■□□□□ 0.78
VTA1Q9NP79 AC004832.2-201ENST00000426397 482 ntBASIC19.91■□□□□ 0.78
VTA1Q9NP79 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.91■□□□□ 0.78
VTA1Q9NP79 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.91■□□□□ 0.78
VTA1Q9NP79 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.91■□□□□ 0.78
VTA1Q9NP79 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms