Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.14■□□□□ 0.33
PIF1Q9H611 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PIF1Q9H611 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PIF1Q9H611 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.14■□□□□ 0.33
PIF1Q9H611 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.14■□□□□ 0.33
PIF1Q9H611 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PIF1Q9H611 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PIF1Q9H611 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PIF1Q9H611 AL023806.1-201ENST00000603994 1649 ntBASIC17.14■□□□□ 0.33
PIF1Q9H611 AC096733.2-201ENST00000609937 1394 ntBASIC17.14■□□□□ 0.33
PIF1Q9H611 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.14■□□□□ 0.33
PIF1Q9H611 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PIF1Q9H611 AP001094.4-201ENST00000579008 2176 ntBASIC17.13■□□□□ 0.33
PIF1Q9H611 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PIF1Q9H611 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PIF1Q9H611 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PIF1Q9H611 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PIF1Q9H611 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PIF1Q9H611 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PIF1Q9H611 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PIF1Q9H611 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.13■□□□□ 0.33
PIF1Q9H611 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PIF1Q9H611 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PIF1Q9H611 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
PIF1Q9H611 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PIF1Q9H611 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PIF1Q9H611 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.13■□□□□ 0.33
PIF1Q9H611 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.13■□□□□ 0.33
PIF1Q9H611 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.13■□□□□ 0.33
PIF1Q9H611 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.13■□□□□ 0.33
PIF1Q9H611 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.13■□□□□ 0.33
PIF1Q9H611 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.13■□□□□ 0.33
PIF1Q9H611 Z99916.2-201ENST00000604037 246 ntBASIC17.13■□□□□ 0.33
PIF1Q9H611 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.13■□□□□ 0.33
PIF1Q9H611 AC113410.3-201ENST00000623366 203 ntBASIC17.13■□□□□ 0.33
PIF1Q9H611 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.13■□□□□ 0.33
PIF1Q9H611 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.13■□□□□ 0.33
PIF1Q9H611 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PIF1Q9H611 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PIF1Q9H611 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.13■□□□□ 0.33
PIF1Q9H611 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PIF1Q9H611 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PIF1Q9H611 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PIF1Q9H611 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
PIF1Q9H611 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PIF1Q9H611 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.13■□□□□ 0.33
PIF1Q9H611 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PIF1Q9H611 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PIF1Q9H611 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PIF1Q9H611 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.12■□□□□ 0.33
PIF1Q9H611 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.12■□□□□ 0.33
PIF1Q9H611 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PIF1Q9H611 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.12■□□□□ 0.33
PIF1Q9H611 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PIF1Q9H611 AC011676.5-201ENST00000624864 2660 ntBASIC17.12■□□□□ 0.33
PIF1Q9H611 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.12■□□□□ 0.33
PIF1Q9H611 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PIF1Q9H611 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.12■□□□□ 0.33
PIF1Q9H611 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 KRT18P23-201ENST00000435622 1283 ntBASIC17.12■□□□□ 0.33
PIF1Q9H611 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 AC116562.2-201ENST00000507042 360 ntBASIC17.12■□□□□ 0.33
PIF1Q9H611 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.12■□□□□ 0.33
PIF1Q9H611 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.12■□□□□ 0.33
PIF1Q9H611 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PIF1Q9H611 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.12■□□□□ 0.33
PIF1Q9H611 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.12■□□□□ 0.33
PIF1Q9H611 TNRC18P3-201ENST00000441896 2691 ntBASIC17.12■□□□□ 0.33
PIF1Q9H611 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PIF1Q9H611 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.12■□□□□ 0.33
PIF1Q9H611 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PIF1Q9H611 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.11■□□□□ 0.33
PIF1Q9H611 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PIF1Q9H611 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PIF1Q9H611 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PIF1Q9H611 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PIF1Q9H611 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PIF1Q9H611 NKILA-202ENST00000614771 2598 ntBASIC17.11■□□□□ 0.33
PIF1Q9H611 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PIF1Q9H611 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PIF1Q9H611 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PIF1Q9H611 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms