Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 AC007922.2-201ENST00000579049 281 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 AC025449.1-201ENST00000603896 529 ntBASIC19.98■□□□□ 0.79
RNF39Q9H2S5 AL390719.2-201ENST00000606993 987 ntBASIC19.98■□□□□ 0.79
RNF39Q9H2S5 AC008121.2-201ENST00000614647 523 ntBASIC19.98■□□□□ 0.79
RNF39Q9H2S5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF39Q9H2S5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 CLEC4C-201ENST00000354629 1126 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 AC011290.1-201ENST00000439751 414 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 AC087627.1-201ENST00000522339 993 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 AC134698.4-201ENST00000523451 826 ntBASIC19.97■□□□□ 0.79
RNF39Q9H2S5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 AC024563.2-201ENST00000603282 481 ntBASIC19.97■□□□□ 0.79
RNF39Q9H2S5 AL161912.3-201ENST00000605404 628 ntBASIC19.97■□□□□ 0.79
RNF39Q9H2S5 Z99129.2-201ENST00000619967 314 ntBASIC19.97■□□□□ 0.79
RNF39Q9H2S5 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF39Q9H2S5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 AC016831.2-201ENST00000417179 352 ntBASIC19.96■□□□□ 0.79
RNF39Q9H2S5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 AADACP1-203ENST00000471766 707 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 KLF3-AS1-205ENST00000507091 642 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 AC027013.1-201ENST00000554412 1057 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 TPSP2-201ENST00000561760 610 ntBASIC19.96■□□□□ 0.79
RNF39Q9H2S5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 MIR3652-201ENST00000579335 131 ntBASIC19.96■□□□□ 0.79
RNF39Q9H2S5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF39Q9H2S5 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
RNF39Q9H2S5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
RNF39Q9H2S5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF39Q9H2S5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms