Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 BX664615.1-201ENST00000443558 458 ntBASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CCDC68Q9H2F9 AC106820.2-201ENST00000563775 3264 ntBASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 RASA4DP-201ENST00000460726 1199 ntBASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 AC022898.2-201ENST00000616822 1312 ntBASIC17.97■□□□□ 0.47
CCDC68Q9H2F9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 PRORSD1P-202ENST00000563365 2154 ntBASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 TERF1P1-201ENST00000311003 1181 ntBASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 AC012306.2-201ENST00000609350 630 ntBASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 AC134043.2-201ENST00000624206 2238 ntBASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC68Q9H2F9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC68Q9H2F9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC68Q9H2F9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 LINC01023-201ENST00000606054 436 ntBASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC68Q9H2F9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms