Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 NUDT16P1-203ENST00000513809 620 ntBASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC9.09□□□□□ -0.95
KRTAP3-1Q9BYR8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.96
KRTAP3-1Q9BYR8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC9.09□□□□□ -0.96
KRTAP3-1Q9BYR8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 PCDHA14-201ENST00000506751 2298 ntBASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 AC009949.1-201ENST00000623048 1830 ntBASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 AC022494.1-201ENST00000466044 728 ntBASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 AC092666.2-201ENST00000613287 246 ntBASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 AC112497.1-201ENST00000624824 639 ntBASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 FLJ38576-201ENST00000623820 2459 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms