Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPS4Q9BT78 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPS4Q9BT78 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.46■□□□□ 0.23
COPS4Q9BT78 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPS4Q9BT78 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.46■□□□□ 0.23
COPS4Q9BT78 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COPS4Q9BT78 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.46■□□□□ 0.23
COPS4Q9BT78 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPS4Q9BT78 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COPS4Q9BT78 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPS4Q9BT78 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
COPS4Q9BT78 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.46■□□□□ 0.23
COPS4Q9BT78 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.46■□□□□ 0.23
COPS4Q9BT78 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.46■□□□□ 0.23
COPS4Q9BT78 FAM197Y1-201ENST00000421178 764 ntBASIC16.46■□□□□ 0.23
COPS4Q9BT78 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.46■□□□□ 0.23
COPS4Q9BT78 AC142381.4-202ENST00000563973 229 ntBASIC16.46■□□□□ 0.23
COPS4Q9BT78 CKBP1-201ENST00000565489 1086 ntBASIC16.46■□□□□ 0.23
COPS4Q9BT78 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
COPS4Q9BT78 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
COPS4Q9BT78 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPS4Q9BT78 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.46■□□□□ 0.23
COPS4Q9BT78 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COPS4Q9BT78 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
COPS4Q9BT78 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.46■□□□□ 0.23
COPS4Q9BT78 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPS4Q9BT78 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPS4Q9BT78 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COPS4Q9BT78 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COPS4Q9BT78 AL109659.2-201ENST00000606809 1674 ntBASIC16.46■□□□□ 0.23
COPS4Q9BT78 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.46■□□□□ 0.23
COPS4Q9BT78 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.46■□□□□ 0.22
COPS4Q9BT78 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
COPS4Q9BT78 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
COPS4Q9BT78 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
COPS4Q9BT78 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
COPS4Q9BT78 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
COPS4Q9BT78 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 CROCCP2-202ENST00000412962 2773 ntBASIC16.45■□□□□ 0.22
COPS4Q9BT78 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 PRORSD1P-201ENST00000295112 541 ntBASIC16.45■□□□□ 0.22
COPS4Q9BT78 B3GAT3P1-201ENST00000471720 806 ntBASIC16.45■□□□□ 0.22
COPS4Q9BT78 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 AC130371.2-201ENST00000619443 611 ntBASIC16.45■□□□□ 0.22
COPS4Q9BT78 FSCN1P1-201ENST00000568912 1481 ntBASIC16.45■□□□□ 0.22
COPS4Q9BT78 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COPS4Q9BT78 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COPS4Q9BT78 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.44■□□□□ 0.22
COPS4Q9BT78 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPS4Q9BT78 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.44■□□□□ 0.22
COPS4Q9BT78 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPS4Q9BT78 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
COPS4Q9BT78 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COPS4Q9BT78 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.44■□□□□ 0.22
COPS4Q9BT78 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COPS4Q9BT78 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.44■□□□□ 0.22
COPS4Q9BT78 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPS4Q9BT78 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.44■□□□□ 0.22
COPS4Q9BT78 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPS4Q9BT78 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPS4Q9BT78 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COPS4Q9BT78 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPS4Q9BT78 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
COPS4Q9BT78 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COPS4Q9BT78 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.44■□□□□ 0.22
COPS4Q9BT78 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.44■□□□□ 0.22
COPS4Q9BT78 AL158047.1-201ENST00000445918 881 ntBASIC16.44■□□□□ 0.22
COPS4Q9BT78 AC008040.2-201ENST00000461049 708 ntBASIC16.44■□□□□ 0.22
COPS4Q9BT78 AC011506.1-201ENST00000474329 610 ntBASIC16.44■□□□□ 0.22
COPS4Q9BT78 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms