Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 KSR1P1-201ENST00000446298 240 ntBASIC13.7□□□□□ -0.22
LINC00479Q96M42 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 AP003097.1-201ENST00000530657 1135 ntBASIC13.7□□□□□ -0.22
LINC00479Q96M42 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 AGGF1P2-201ENST00000426656 2106 ntBASIC13.7□□□□□ -0.22
LINC00479Q96M42 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LINC00479Q96M42 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00479Q96M42 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.69□□□□□ -0.22
LINC00479Q96M42 AC079328.2-201ENST00000561241 3354 ntBASIC13.69□□□□□ -0.22
LINC00479Q96M42 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 AC011506.1-201ENST00000474329 610 ntBASIC13.69□□□□□ -0.22
LINC00479Q96M42 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 AL109923.1-201ENST00000618799 583 ntBASIC13.69□□□□□ -0.22
LINC00479Q96M42 CR392000.1-201ENST00000624770 1228 ntBASIC13.69□□□□□ -0.22
LINC00479Q96M42 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 AC105020.1-201ENST00000435356 2205 ntBASIC13.69□□□□□ -0.22
LINC00479Q96M42 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00479Q96M42 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.69□□□□□ -0.22
LINC00479Q96M42 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LINC00479Q96M42 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LINC00479Q96M42 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00479Q96M42 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms