Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 AC010460.3-201ENST00000511359 1579 ntBASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTHRC1Q96CG8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 VENTXP7-201ENST00000475503 772 ntBASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CTHRC1Q96CG8 LINC00304-203ENST00000565008 1864 ntBASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 AL355312.1-201ENST00000407115 2176 ntBASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 COX5BP2-201ENST00000392354 334 ntBASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 LINC00896-202ENST00000609602 2128 ntBASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.56■□□□□ 0.24
CTHRC1Q96CG8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 IGHV3-47-201ENST00000425060 335 ntBASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 AC005104.2-201ENST00000427818 678 ntBASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 AC007967.3-201ENST00000434308 558 ntBASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 TOB2P1-201ENST00000469761 992 ntBASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.55■□□□□ 0.24
CTHRC1Q96CG8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms