Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 AL353692.3-201ENST00000407031 1396 ntBASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 SDHAP2-201ENST00000455183 2001 ntBASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SH3KBP1Q96B97 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 GMCL1P1-201ENST00000463439 1581 ntBASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 TPSP2-201ENST00000561760 610 ntBASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SH3KBP1Q96B97 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 LINC00265-3P-201ENST00000447588 903 ntBASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 VENTXP7-201ENST00000475503 772 ntBASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 AC113404.2-201ENST00000507884 177 ntBASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SH3KBP1Q96B97 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SH3KBP1Q96B97 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SH3KBP1Q96B97 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SH3KBP1Q96B97 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SH3KBP1Q96B97 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SH3KBP1Q96B97 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms