Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC23.37■■□□□ 1.33
RAPGEF4Q8WZA2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 ELK2BP-201ENST00000415014 1224 ntBASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 KRT18P2-201ENST00000447938 1258 ntBASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAPGEF4Q8WZA2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 AC132938.5-201ENST00000624980 1813 ntBASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 AC073592.3-201ENST00000625118 1834 ntBASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 AL049757.1-201ENST00000616842 1596 ntBASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC23.35■■□□□ 1.33
RAPGEF4Q8WZA2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 DNAJB3-202ENST00000449667 1266 ntBASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 AC006504.4-201ENST00000592118 1568 ntBASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAPGEF4Q8WZA2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 AC211486.1-202ENST00000416371 468 ntBASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 AC211476.1-201ENST00000503899 468 ntBASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RAPGEF4Q8WZA2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC23.33■■□□□ 1.32
RAPGEF4Q8WZA2 AC148477.5-201ENST00000625164 1645 ntBASIC23.33■■□□□ 1.32
RAPGEF4Q8WZA2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RAPGEF4Q8WZA2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC23.33■■□□□ 1.32
RAPGEF4Q8WZA2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RAPGEF4Q8WZA2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAPGEF4Q8WZA2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms