Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 AC026271.3-201ENST00000571884 352 ntBASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 HOXB1-202ENST00000577092 1414 ntBASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 AC011270.2-201ENST00000624293 2550 ntBASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.8■□□□□ 0.44
CKAP2Q8WWK9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 AL391005.1-201ENST00000623953 2435 ntBASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.79■□□□□ 0.44
CKAP2Q8WWK9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 AC011506.1-201ENST00000474329 610 ntBASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 AL603756.1-201ENST00000606511 2163 ntBASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CKAP2Q8WWK9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CKAP2Q8WWK9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CKAP2Q8WWK9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CKAP2Q8WWK9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CKAP2Q8WWK9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms