Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
CHMP7Q8WUX9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
CHMP7Q8WUX9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 AL161938.1-201ENST00000569833 2180 ntBASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
CHMP7Q8WUX9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 AC112191.1-201ENST00000523689 701 ntBASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 AP005018.1-201ENST00000525475 301 ntBASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
CHMP7Q8WUX9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC28.8■■■□□ 2.2
CHMP7Q8WUX9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC28.8■■■□□ 2.2
CHMP7Q8WUX9 MIR943-201ENST00000401286 94 ntBASIC28.8■■■□□ 2.2
CHMP7Q8WUX9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC28.8■■■□□ 2.2
CHMP7Q8WUX9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CHMP7Q8WUX9 FAM207CP-201ENST00000443486 507 ntBASIC28.8■■■□□ 2.2
CHMP7Q8WUX9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC28.8■■■□□ 2.2
CHMP7Q8WUX9 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC28.8■■■□□ 2.2
CHMP7Q8WUX9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC28.8■■■□□ 2.2
CHMP7Q8WUX9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC28.8■■■□□ 2.2
CHMP7Q8WUX9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CHMP7Q8WUX9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHMP7Q8WUX9 AC005082.1-201ENST00000413042 2259 ntBASIC28.8■■■□□ 2.2
CHMP7Q8WUX9 AL049812.1-201ENST00000432563 2267 ntBASIC28.8■■■□□ 2.2
CHMP7Q8WUX9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 LINC02560-201ENST00000596379 459 ntBASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 AC008761.3-201ENST00000624803 892 ntBASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
CHMP7Q8WUX9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 AC026120.1-201ENST00000611536 926 ntBASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CHMP7Q8WUX9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CHMP7Q8WUX9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHMP7Q8WUX9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHMP7Q8WUX9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHMP7Q8WUX9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CHMP7Q8WUX9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC28.77■■■□□ 2.2
CHMP7Q8WUX9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC28.77■■■□□ 2.2
CHMP7Q8WUX9 AL512356.2-201ENST00000546955 174 ntBASIC28.77■■■□□ 2.2
CHMP7Q8WUX9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CHMP7Q8WUX9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC28.77■■■□□ 2.2
CHMP7Q8WUX9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC28.77■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms