Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPS4Y2Q8TD47 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPS4Y2Q8TD47 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RPS4Y2Q8TD47 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RPS4Y2Q8TD47 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPS4Y2Q8TD47 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPS4Y2Q8TD47 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RPS4Y2Q8TD47 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RPS4Y2Q8TD47 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 DDX43P3-201ENST00000441064 443 ntBASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.68■□□□□ 0.1
RPS4Y2Q8TD47 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 AL118508.1-201ENST00000613502 2345 ntBASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 BX088651.1-201ENST00000540551 451 ntBASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 AC026471.5-201ENST00000615068 467 ntBASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.67■□□□□ 0.1
RPS4Y2Q8TD47 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 AC009949.1-201ENST00000623048 1830 ntBASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 AC007663.1-201ENST00000438948 1240 ntBASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 AC116407.2-201ENST00000613639 860 ntBASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms