Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 AC003669.1-201ENST00000334569 611 ntBASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 KRT8P48-201ENST00000515599 1220 ntBASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC11.96□□□□□ -0.49
ALMS1Q8TCU4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 AL353593.2-201ENST00000602529 1483 ntBASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 CNN2P2-201ENST00000443536 909 ntBASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 CNN2P3-201ENST00000450201 906 ntBASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 AL136317.3-201ENST00000618497 906 ntBASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ALMS1Q8TCU4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 AC025048.6-201ENST00000634326 1161 ntBASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 PCDHAC2-203ENST00000615316 3011 ntBASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 AC055876.3-201ENST00000431496 288 ntBASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 TERF1P3-201ENST00000505638 1227 ntBASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 AC138649.4-201ENST00000612222 287 ntBASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 ARSEP1-201ENST00000420443 635 ntBASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 TREML5P-201ENST00000421694 576 ntBASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 ACTL9-202ENST00000612068 1252 ntBASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ALMS1Q8TCU4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 AL512356.2-201ENST00000546955 174 ntBASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 AC010336.2-201ENST00000564226 506 ntBASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.94□□□□□ -0.5
ALMS1Q8TCU4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms