Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 AP000997.3-201ENST00000623333 2250 ntBASIC18.79■□□□□ 0.6
SHKBP1Q8TBC3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 MIR7706-201ENST00000613747 67 ntBASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHKBP1Q8TBC3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 WIZP1-201ENST00000531444 2299 ntBASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 AC073648.2-201ENST00000510116 352 ntBASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 AC112698.1-201ENST00000510299 916 ntBASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SHKBP1Q8TBC3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
SHKBP1Q8TBC3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.77■□□□□ 0.59
SHKBP1Q8TBC3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.77■□□□□ 0.59
SHKBP1Q8TBC3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 MIR574-201ENST00000385209 96 ntBASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 HNRNPDP1-201ENST00000439535 754 ntBASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 FAM215A-202ENST00000632077 792 ntBASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHKBP1Q8TBC3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms