Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 AL049812.1-201ENST00000432563 2267 ntBASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 STK25P1-201ENST00000585406 838 ntBASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 AC009336.1-201ENST00000608941 1553 ntBASIC23.69■■□□□ 1.38
COL22A1Q8NFW1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 BASP1P1-201ENST00000430708 665 ntBASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC23.68■■□□□ 1.38
COL22A1Q8NFW1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 SPDYE11-202ENST00000450699 704 ntBASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 SPDYE9P-201ENST00000570642 692 ntBASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 COX11-202ENST00000571584 1108 ntTSL 2 BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 SPDYE10P-202ENST00000612005 668 ntBASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 SPDYE8P-202ENST00000612377 668 ntBASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
COL22A1Q8NFW1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 INGX-202ENST00000489074 768 ntBASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 GATB-205ENST00000508611 605 ntTSL 2 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 LINC02560-201ENST00000596379 459 ntBASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 CYP51A1P2-201ENST00000419457 1499 ntBASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 ACTG1P4-201ENST00000425123 1122 ntBASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 AC140878.1-201ENST00000565277 250 ntBASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL22A1Q8NFW1 GMCL1P1-201ENST00000463439 1581 ntBASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 HNRNPFP1-201ENST00000391730 1133 ntBASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 STK19B-204ENST00000512515 211 ntBASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms