Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 AC011498.5-201ENST00000592027 486 ntBASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 RNF126P1-202ENST00000569893 925 ntBASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.1■□□□□ 0.33
SRFBP1Q8NEF9 NOC2LP2-201ENST00000407594 1944 ntBASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 TSPY22P-201ENST00000427496 604 ntBASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 FAM86EP-206ENST00000510506 987 ntBASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 KRT8P26-201ENST00000534154 1276 ntBASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 AC090616.6-201ENST00000582640 721 ntBASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.09■□□□□ 0.33
SRFBP1Q8NEF9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms