Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA6Q8N139 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA6Q8N139 PTCHD3P3-201ENST00000403073 906 ntBASIC26.3■■□□□ 1.8
ABCA6Q8N139 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC26.3■■□□□ 1.8
ABCA6Q8N139 AC074386.1-202ENST00000463561 864 ntBASIC26.3■■□□□ 1.8
ABCA6Q8N139 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC26.3■■□□□ 1.8
ABCA6Q8N139 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA6Q8N139 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC26.3■■□□□ 1.8
ABCA6Q8N139 AC015911.4-201ENST00000588022 1070 ntBASIC26.3■■□□□ 1.8
ABCA6Q8N139 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
ABCA6Q8N139 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA6Q8N139 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
ABCA6Q8N139 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA6Q8N139 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ABCA6Q8N139 ADM-207ENST00000530439 1839 ntTSL 2 BASIC26.3■■□□□ 1.8
ABCA6Q8N139 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA6Q8N139 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC26.29■■□□□ 1.8
ABCA6Q8N139 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC26.29■■□□□ 1.8
ABCA6Q8N139 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
ABCA6Q8N139 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA6Q8N139 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA6Q8N139 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA6Q8N139 MIR661-201ENST00000384842 89 ntBASIC26.29■■□□□ 1.8
ABCA6Q8N139 AL627223.1-201ENST00000416693 442 ntBASIC26.29■■□□□ 1.8
ABCA6Q8N139 AC244107.1-201ENST00000442033 332 ntBASIC26.29■■□□□ 1.8
ABCA6Q8N139 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC26.29■■□□□ 1.8
ABCA6Q8N139 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC26.29■■□□□ 1.8
ABCA6Q8N139 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC26.29■■□□□ 1.8
ABCA6Q8N139 MED16-214ENST00000617672 554 ntTSL 5 BASIC26.29■■□□□ 1.8
ABCA6Q8N139 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
ABCA6Q8N139 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA6Q8N139 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC26.29■■□□□ 1.8
ABCA6Q8N139 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC26.29■■□□□ 1.8
ABCA6Q8N139 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA6Q8N139 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC26.29■■□□□ 1.8
ABCA6Q8N139 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA6Q8N139 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCA6Q8N139 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA6Q8N139 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA6Q8N139 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA6Q8N139 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC26.28■■□□□ 1.8
ABCA6Q8N139 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
ABCA6Q8N139 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC26.28■■□□□ 1.8
ABCA6Q8N139 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC26.28■■□□□ 1.8
ABCA6Q8N139 AC023141.13-201ENST00000604991 943 ntBASIC26.28■■□□□ 1.8
ABCA6Q8N139 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC26.28■■□□□ 1.8
ABCA6Q8N139 AC099522.2-201ENST00000607001 744 ntBASIC26.28■■□□□ 1.8
ABCA6Q8N139 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA6Q8N139 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA6Q8N139 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA6Q8N139 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
ABCA6Q8N139 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC26.28■■□□□ 1.8
ABCA6Q8N139 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA6Q8N139 AC018445.3-201ENST00000624177 1945 ntBASIC26.28■■□□□ 1.8
ABCA6Q8N139 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
ABCA6Q8N139 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA6Q8N139 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ABCA6Q8N139 SIGLEC30P-201ENST00000455569 941 ntBASIC26.28■■□□□ 1.8
ABCA6Q8N139 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC26.28■■□□□ 1.8
ABCA6Q8N139 MIR4745-201ENST00000577608 62 ntBASIC26.28■■□□□ 1.8
ABCA6Q8N139 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC26.28■■□□□ 1.8
ABCA6Q8N139 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
ABCA6Q8N139 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ABCA6Q8N139 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
ABCA6Q8N139 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.27■■□□□ 1.8
ABCA6Q8N139 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
ABCA6Q8N139 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
ABCA6Q8N139 FAM86GP-201ENST00000448322 971 ntBASIC26.27■■□□□ 1.8
ABCA6Q8N139 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ABCA6Q8N139 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
ABCA6Q8N139 AQP6-203ENST00000551733 849 ntTSL 3 BASIC26.27■■□□□ 1.8
ABCA6Q8N139 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
ABCA6Q8N139 STK25P1-201ENST00000585406 838 ntBASIC26.27■■□□□ 1.8
ABCA6Q8N139 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ABCA6Q8N139 LINC00628-201ENST00000628516 1289 ntBASIC26.27■■□□□ 1.8
ABCA6Q8N139 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC26.27■■□□□ 1.8
ABCA6Q8N139 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC26.27■■□□□ 1.8
ABCA6Q8N139 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC26.27■■□□□ 1.8
ABCA6Q8N139 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ABCA6Q8N139 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
ABCA6Q8N139 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
ABCA6Q8N139 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC26.26■■□□□ 1.8
ABCA6Q8N139 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC26.26■■□□□ 1.79
ABCA6Q8N139 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ABCA6Q8N139 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ABCA6Q8N139 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ABCA6Q8N139 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ABCA6Q8N139 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ABCA6Q8N139 PMS2P4-201ENST00000412466 1052 ntBASIC26.26■■□□□ 1.79
ABCA6Q8N139 PUDP-206ENST00000540122 825 ntTSL 2 BASIC26.26■■□□□ 1.79
ABCA6Q8N139 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ABCA6Q8N139 AC004449.1-201ENST00000564240 433 ntBASIC26.26■■□□□ 1.79
ABCA6Q8N139 TK1-204ENST00000590430 683 ntTSL 3 BASIC26.26■■□□□ 1.79
ABCA6Q8N139 AL035252.4-201ENST00000624174 288 ntBASIC26.26■■□□□ 1.79
ABCA6Q8N139 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC26.26■■□□□ 1.79
ABCA6Q8N139 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ABCA6Q8N139 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC26.26■■□□□ 1.79
ABCA6Q8N139 AC009336.1-201ENST00000608941 1553 ntBASIC26.26■■□□□ 1.79
ABCA6Q8N139 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
ABCA6Q8N139 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms