Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 FAM210CP-201ENST00000445714 574 ntBASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 AL049597.2-201ENST00000565575 961 ntBASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 NIFKP4-201ENST00000567275 1192 ntBASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 AC083849.1-201ENST00000615227 514 ntBASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC116Q8IYX3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
CCDC116Q8IYX3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC116Q8IYX3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC116Q8IYX3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 TSPY12P-201ENST00000421279 868 ntBASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 KRT18P65-201ENST00000439811 1286 ntBASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 SPDYE13P-201ENST00000445314 798 ntBASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 AC005332.3-201ENST00000589904 676 ntBASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 AL353692.3-201ENST00000407031 1396 ntBASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC116Q8IYX3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms