Protein–RNA interactions for Protein: Q8IYA8

CCDC36, Interactor of HORMAD1 protein 1, humanhuman

Predictions only

Length 594 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36Q8IYA8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 KRT89P-201ENST00000620027 1478 ntBASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 AL391005.1-201ENST00000623953 2435 ntBASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 HLA-F-220ENST00000434407 884 ntBASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 AL671277.2-201ENST00000458060 996 ntBASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 AL136038.4-201ENST00000603606 1261 ntBASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 AC010331.1-201ENST00000611423 582 ntBASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC36Q8IYA8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 LINC01311-201ENST00000565162 1445 ntBASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 AL391807.1-203ENST00000604392 2365 ntBASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 SPDYE15P-201ENST00000424157 909 ntBASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 NTF6B-201ENST00000591913 560 ntBASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 AL121956.5-201ENST00000625261 221 ntBASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC36Q8IYA8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 AC141586.5-201ENST00000624546 2050 ntBASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 HBZP1-201ENST00000354915 429 ntBASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC36Q8IYA8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms