Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MIR3180-1-201ENST00000580374 94 ntBASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 MIR3180-3-201ENST00000584616 94 ntBASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 AC092119.3-201ENST00000612618 583 ntBASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 AC008764.6-201ENST00000595909 2069 ntBASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCUBE3Q8IX30 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCUBE3Q8IX30 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCUBE3Q8IX30 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCUBE3Q8IX30 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCUBE3Q8IX30 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.83■□□□□ 0.61
SCUBE3Q8IX30 KRT8P47-201ENST00000604727 1398 ntBASIC18.83■□□□□ 0.61
SCUBE3Q8IX30 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.83■□□□□ 0.61
SCUBE3Q8IX30 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCUBE3Q8IX30 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCUBE3Q8IX30 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCUBE3Q8IX30 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.83■□□□□ 0.61
SCUBE3Q8IX30 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCUBE3Q8IX30 AC138932.1-201ENST00000534164 6830 ntBASIC18.83■□□□□ 0.61
SCUBE3Q8IX30 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 ATP5G2P1-201ENST00000433580 426 ntBASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 DUSP5P1-201ENST00000441325 1139 ntBASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 TPSP2-201ENST00000561760 610 ntBASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 AL353801.3-201ENST00000609898 542 ntBASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 AC012317.2-201ENST00000623305 2251 ntBASIC18.83■□□□□ 0.6
SCUBE3Q8IX30 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 DRAXINP1-201ENST00000437611 948 ntBASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 AC091607.1-201ENST00000490318 1060 ntBASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 AC068880.1-201ENST00000507289 2297 ntBASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCUBE3Q8IX30 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 NOC2LP2-201ENST00000407594 1944 ntBASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms