Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 GK-202ENST00000378941 458 ntTSL 3 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 AC093214.1-201ENST00000511688 1107 ntBASIC22.32■■□□□ 1.16
COL23A1Q86Y22 RNA5SP421-201ENST00000516864 134 ntBASIC22.32■■□□□ 1.16
COL23A1Q86Y22 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL23A1Q86Y22 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 KLF4P1-201ENST00000412782 1185 ntBASIC22.31■■□□□ 1.16
COL23A1Q86Y22 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 NMU-203ENST00000507338 658 ntTSL 3 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.31■■□□□ 1.16
COL23A1Q86Y22 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 AP002414.1-201ENST00000391405 1147 ntBASIC22.3■■□□□ 1.16
COL23A1Q86Y22 PMS2P4-201ENST00000412466 1052 ntBASIC22.3■■□□□ 1.16
COL23A1Q86Y22 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 AC015911.4-201ENST00000588022 1070 ntBASIC22.3■■□□□ 1.16
COL23A1Q86Y22 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 AC012645.4-201ENST00000610691 1061 ntBASIC22.3■■□□□ 1.16
COL23A1Q86Y22 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 FUT8-AS1-201ENST00000621019 1521 ntBASIC22.3■■□□□ 1.16
COL23A1Q86Y22 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL23A1Q86Y22 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL23A1Q86Y22 MIR661-201ENST00000384842 89 ntBASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms