Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHFQ7M4L6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHFQ7M4L6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHFQ7M4L6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.22■□□□□ 0.19
SHFQ7M4L6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHFQ7M4L6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.22■□□□□ 0.19
SHFQ7M4L6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 AC100803.2-201ENST00000562459 1963 ntBASIC16.21■□□□□ 0.19
SHFQ7M4L6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 SLC25A1P2-201ENST00000430693 912 ntBASIC16.21■□□□□ 0.19
SHFQ7M4L6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.21■□□□□ 0.19
SHFQ7M4L6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHFQ7M4L6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SHFQ7M4L6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHFQ7M4L6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHFQ7M4L6 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHFQ7M4L6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHFQ7M4L6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 CROCCP1-201ENST00000426910 5675 ntBASIC16.2■□□□□ 0.18
SHFQ7M4L6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHFQ7M4L6 UNC93B2-201ENST00000285383 730 ntBASIC16.2■□□□□ 0.18
SHFQ7M4L6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 KRT18P23-201ENST00000435622 1283 ntBASIC16.2■□□□□ 0.18
SHFQ7M4L6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHFQ7M4L6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHFQ7M4L6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHFQ7M4L6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHFQ7M4L6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHFQ7M4L6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHFQ7M4L6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHFQ7M4L6 CROCCP2-202ENST00000412962 2773 ntBASIC16.2■□□□□ 0.18
SHFQ7M4L6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHFQ7M4L6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHFQ7M4L6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.2■□□□□ 0.18
SHFQ7M4L6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHFQ7M4L6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.19■□□□□ 0.18
SHFQ7M4L6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHFQ7M4L6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHFQ7M4L6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SHFQ7M4L6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.19■□□□□ 0.18
SHFQ7M4L6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHFQ7M4L6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.19■□□□□ 0.18
SHFQ7M4L6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHFQ7M4L6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.19■□□□□ 0.18
SHFQ7M4L6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHFQ7M4L6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.19■□□□□ 0.18
SHFQ7M4L6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHFQ7M4L6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SHFQ7M4L6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHFQ7M4L6 CCR12P-201ENST00000446203 998 ntBASIC16.19■□□□□ 0.18
SHFQ7M4L6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.19■□□□□ 0.18
SHFQ7M4L6 AP003071.4-201ENST00000562276 1284 ntBASIC16.19■□□□□ 0.18
SHFQ7M4L6 AL353719.1-201ENST00000566847 864 ntBASIC16.19■□□□□ 0.18
SHFQ7M4L6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.19■□□□□ 0.18
SHFQ7M4L6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHFQ7M4L6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHFQ7M4L6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.19■□□□□ 0.18
SHFQ7M4L6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms