Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 HYMAI.1-201ENST00000620949 238 ntBASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.54■□□□□ 0.24
CHMP1BQ7LBR1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 AC068880.1-201ENST00000507289 2297 ntBASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 PVRIG2P-201ENST00000435460 978 ntBASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 KRT18P41-201ENST00000518924 1277 ntBASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 KRT8P50-201ENST00000562022 1438 ntBASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 NOC2LP2-201ENST00000407594 1944 ntBASIC16.53■□□□□ 0.24
CHMP1BQ7LBR1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 AC069148.1-201ENST00000608741 768 ntBASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 AC093458.2-201ENST00000623150 629 ntBASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 AC116407.4-201ENST00000623319 1061 ntBASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.52■□□□□ 0.24
CHMP1BQ7LBR1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms