Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 LINC01023-201ENST00000606054 436 ntBASIC16.57■□□□□ 0.24
TUBA1AQ71U36 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.57■□□□□ 0.24
TUBA1AQ71U36 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 AL499627.1-201ENST00000569373 2188 ntBASIC16.56■□□□□ 0.24
TUBA1AQ71U36 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.56■□□□□ 0.24
TUBA1AQ71U36 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 TSPY14P-201ENST00000303979 915 ntBASIC16.55■□□□□ 0.24
TUBA1AQ71U36 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 EGLN1P1-201ENST00000531623 762 ntBASIC16.55■□□□□ 0.24
TUBA1AQ71U36 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TUBA1AQ71U36 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 AC145285.6-201ENST00000604632 637 ntBASIC16.54■□□□□ 0.24
TUBA1AQ71U36 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
TUBA1AQ71U36 AC116562.4-202ENST00000641738 218 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms