Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TTC39AQ5SRH9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.77■■□□□ 1.07
TTC39AQ5SRH9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 AC007967.3-201ENST00000434308 558 ntBASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.76■■□□□ 1.07
TTC39AQ5SRH9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 FLJ13224-201ENST00000313737 1514 ntBASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 INTS4P1-201ENST00000438455 1935 ntBASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 AC097374.2-201ENST00000618617 1306 ntBASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39AQ5SRH9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 AC096633.1-201ENST00000422446 749 ntBASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39AQ5SRH9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 AC138028.4-201ENST00000564984 1845 ntBASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39AQ5SRH9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms