Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.45■□□□□ 0.38
SGO1Q5FBB7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 LIN28AP1-201ENST00000429574 405 ntBASIC17.44■□□□□ 0.38
SGO1Q5FBB7 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.44■□□□□ 0.38
SGO1Q5FBB7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 AC145285.6-201ENST00000604632 637 ntBASIC17.44■□□□□ 0.38
SGO1Q5FBB7 AC140113.3-201ENST00000605663 199 ntBASIC17.44■□□□□ 0.38
SGO1Q5FBB7 AC132938.6-201ENST00000623828 1655 ntBASIC17.44■□□□□ 0.38
SGO1Q5FBB7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SGO1Q5FBB7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 KRT18P55-202ENST00000578578 1546 ntBASIC17.43■□□□□ 0.38
SGO1Q5FBB7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 AP000523.1-201ENST00000398242 1049 ntBASIC17.43■□□□□ 0.38
SGO1Q5FBB7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 SLC25A3P1-201ENST00000443844 931 ntBASIC17.43■□□□□ 0.38
SGO1Q5FBB7 ATP5G1P1-201ENST00000448724 379 ntBASIC17.43■□□□□ 0.38
SGO1Q5FBB7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SGO1Q5FBB7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SGO1Q5FBB7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms