Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 FAM86EP-206ENST00000510506 987 ntBASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.15■□□□□ 0.5
KHDC1Q4VXA5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
KHDC1Q4VXA5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
KHDC1Q4VXA5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
KHDC1Q4VXA5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.14■□□□□ 0.5
KHDC1Q4VXA5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KHDC1Q4VXA5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 AD000864.1-201ENST00000624076 2295 ntBASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 AL121956.5-201ENST00000625261 221 ntBASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 AL024508.2-201ENST00000607749 1894 ntBASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.13■□□□□ 0.49
KHDC1Q4VXA5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.12■□□□□ 0.49
KHDC1Q4VXA5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDC1Q4VXA5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDC1Q4VXA5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDC1Q4VXA5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.12■□□□□ 0.49
KHDC1Q4VXA5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KHDC1Q4VXA5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDC1Q4VXA5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDC1Q4VXA5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KHDC1Q4VXA5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
KHDC1Q4VXA5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms