Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 AC022898.2-201ENST00000616822 1312 ntBASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 KRT8P47-201ENST00000604727 1398 ntBASIC18.68■□□□□ 0.58
ATP13A4Q4VNC1 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 AC112907.2-201ENST00000448639 330 ntBASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ATP13A4Q4VNC1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 MIR662-201ENST00000384847 95 ntBASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 RCN1P1-201ENST00000400413 996 ntBASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 VENTXP5-201ENST00000523979 775 ntBASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP13A4Q4VNC1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 KRT18P65-201ENST00000439811 1286 ntBASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 RN7SL850P-201ENST00000579959 291 ntBASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP13A4Q4VNC1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms