Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 DNAJB3-202ENST00000449667 1266 ntBASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTC1Q2NKJ3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 AL031598.1-201ENST00000561511 1773 ntBASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 AC125634.1-201ENST00000438758 1403 ntBASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 RNA5SP416-201ENST00000516838 111 ntBASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 UNC93B6-202ENST00000528242 690 ntBASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CTC1Q2NKJ3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 AC105339.3-201ENST00000560043 636 ntBASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 FP475955.4-201ENST00000623131 1990 ntBASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CTC1Q2NKJ3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 AC068880.1-201ENST00000507289 2297 ntBASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 AP006288.1-201ENST00000446065 395 ntBASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 AC002347.1-201ENST00000569543 541 ntBASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 AL139288.1-201ENST00000623748 933 ntBASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTC1Q2NKJ3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms