Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HSPG2P98160 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HSPG2P98160 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HSPG2P98160 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
HSPG2P98160 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC10.99□□□□□ -0.65
HSPG2P98160 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC10.99□□□□□ -0.65
HSPG2P98160 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HSPG2P98160 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC10.99□□□□□ -0.65
HSPG2P98160 AC092580.3-201ENST00000430932 139 ntBASIC10.99□□□□□ -0.65
HSPG2P98160 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC10.99□□□□□ -0.65
HSPG2P98160 AC097493.3-201ENST00000509725 367 ntBASIC10.99□□□□□ -0.65
HSPG2P98160 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC10.99□□□□□ -0.65
HSPG2P98160 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.99□□□□□ -0.65
HSPG2P98160 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.99□□□□□ -0.65
HSPG2P98160 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC10.99□□□□□ -0.65
HSPG2P98160 AL353593.2-201ENST00000602529 1483 ntBASIC10.99□□□□□ -0.65
HSPG2P98160 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
HSPG2P98160 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
HSPG2P98160 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
HSPG2P98160 AC122714.2-201ENST00000502787 707 ntBASIC10.99□□□□□ -0.65
HSPG2P98160 IFT20-216ENST00000588477 774 ntTSL 5 BASIC10.99□□□□□ -0.65
HSPG2P98160 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HSPG2P98160 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC10.98□□□□□ -0.65
HSPG2P98160 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HSPG2P98160 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HSPG2P98160 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HSPG2P98160 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC10.98□□□□□ -0.65
HSPG2P98160 VMA21-202ENST00000370361 693 ntTSL 5 BASIC10.98□□□□□ -0.65
HSPG2P98160 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HSPG2P98160 ACA64.2-201ENST00000459014 129 ntBASIC10.98□□□□□ -0.65
HSPG2P98160 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC10.98□□□□□ -0.65
HSPG2P98160 MIR6787-201ENST00000616675 61 ntBASIC10.98□□□□□ -0.65
HSPG2P98160 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
HSPG2P98160 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC10.98□□□□□ -0.65
HSPG2P98160 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
HSPG2P98160 AL355306.1-201ENST00000415580 579 ntBASIC10.98□□□□□ -0.65
HSPG2P98160 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HSPG2P98160 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.98□□□□□ -0.65
HSPG2P98160 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC10.98□□□□□ -0.65
HSPG2P98160 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
HSPG2P98160 AC006116.8-202ENST00000587620 1550 ntBASIC10.98□□□□□ -0.65
HSPG2P98160 KRT18P32-201ENST00000424695 1287 ntBASIC10.98□□□□□ -0.65
HSPG2P98160 SPCS2P4-201ENST00000436160 681 ntBASIC10.98□□□□□ -0.65
HSPG2P98160 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
HSPG2P98160 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HSPG2P98160 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
HSPG2P98160 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC10.98□□□□□ -0.65
HSPG2P98160 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
HSPG2P98160 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HSPG2P98160 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HSPG2P98160 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
HSPG2P98160 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HSPG2P98160 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC10.98□□□□□ -0.65
HSPG2P98160 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC10.98□□□□□ -0.65
HSPG2P98160 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
HSPG2P98160 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HSPG2P98160 ACTL9-202ENST00000612068 1252 ntBASIC10.98□□□□□ -0.65
HSPG2P98160 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
HSPG2P98160 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC10.97□□□□□ -0.65
HSPG2P98160 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
HSPG2P98160 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC10.97□□□□□ -0.65
HSPG2P98160 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
HSPG2P98160 CU639417.3-201ENST00000624240 1404 ntBASIC10.97□□□□□ -0.65
HSPG2P98160 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
HSPG2P98160 PGF-202ENST00000405431 666 ntTSL 5 BASIC10.97□□□□□ -0.65
HSPG2P98160 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC10.97□□□□□ -0.65
HSPG2P98160 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 Six3os1_5.1-201ENST00000611000 271 ntBASIC10.97□□□□□ -0.65
HSPG2P98160 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
HSPG2P98160 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
HSPG2P98160 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.97□□□□□ -0.65
HSPG2P98160 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 PARP8-218ENST00000513738 596 ntTSL 4 BASIC10.97□□□□□ -0.65
HSPG2P98160 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC10.97□□□□□ -0.65
HSPG2P98160 MIR6805-201ENST00000615055 62 ntBASIC10.97□□□□□ -0.65
HSPG2P98160 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC10.97□□□□□ -0.65
HSPG2P98160 AL358472.5-202ENST00000641448 1267 ntBASIC10.97□□□□□ -0.65
HSPG2P98160 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
HSPG2P98160 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
HSPG2P98160 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC10.97□□□□□ -0.65
HSPG2P98160 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC10.97□□□□□ -0.65
HSPG2P98160 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC10.97□□□□□ -0.65
HSPG2P98160 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC10.97□□□□□ -0.65
HSPG2P98160 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC10.97□□□□□ -0.65
HSPG2P98160 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC10.97□□□□□ -0.65
HSPG2P98160 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC10.97□□□□□ -0.65
HSPG2P98160 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HSPG2P98160 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms