Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.26■□□□□ 0.67
SMAD3P84022 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.26■□□□□ 0.67
SMAD3P84022 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.26■□□□□ 0.67
SMAD3P84022 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.26■□□□□ 0.67
SMAD3P84022 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD3P84022 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.26■□□□□ 0.67
SMAD3P84022 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.26■□□□□ 0.67
SMAD3P84022 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMAD3P84022 SIGLEC16-201ENST00000599858 1437 ntBASIC19.25■□□□□ 0.67
SMAD3P84022 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.25■□□□□ 0.67
SMAD3P84022 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.25■□□□□ 0.67
SMAD3P84022 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SMAD3P84022 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.25■□□□□ 0.67
SMAD3P84022 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.25■□□□□ 0.67
SMAD3P84022 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.25■□□□□ 0.67
SMAD3P84022 RNA5SP421-201ENST00000516864 134 ntBASIC19.25■□□□□ 0.67
SMAD3P84022 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SMAD3P84022 AC012645.4-201ENST00000610691 1061 ntBASIC19.25■□□□□ 0.67
SMAD3P84022 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SMAD3P84022 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SMAD3P84022 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SMAD3P84022 MTMR9LP-203ENST00000426597 1545 ntBASIC19.25■□□□□ 0.67
SMAD3P84022 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMAD3P84022 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD3P84022 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD3P84022 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD3P84022 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD3P84022 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.24■□□□□ 0.67
SMAD3P84022 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD3P84022 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD3P84022 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SMAD3P84022 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SMAD3P84022 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.24■□□□□ 0.67
SMAD3P84022 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.24■□□□□ 0.67
SMAD3P84022 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.24■□□□□ 0.67
SMAD3P84022 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.24■□□□□ 0.67
SMAD3P84022 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.24■□□□□ 0.67
SMAD3P84022 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.24■□□□□ 0.67
SMAD3P84022 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.24■□□□□ 0.67
SMAD3P84022 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.24■□□□□ 0.67
SMAD3P84022 AC004706.3-202ENST00000621574 984 ntBASIC19.24■□□□□ 0.67
SMAD3P84022 AL513210.1-201ENST00000629608 234 ntBASIC19.24■□□□□ 0.67
SMAD3P84022 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD3P84022 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SMAD3P84022 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD3P84022 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SMAD3P84022 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SMAD3P84022 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD3P84022 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMAD3P84022 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SMAD3P84022 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD3P84022 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD3P84022 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SMAD3P84022 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD3P84022 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD3P84022 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD3P84022 AL024508.2-201ENST00000607749 1894 ntBASIC19.23■□□□□ 0.67
SMAD3P84022 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SMAD3P84022 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD3P84022 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD3P84022 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.23■□□□□ 0.67
SMAD3P84022 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.23■□□□□ 0.67
SMAD3P84022 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.23■□□□□ 0.67
SMAD3P84022 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.23■□□□□ 0.67
SMAD3P84022 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD3P84022 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.23■□□□□ 0.67
SMAD3P84022 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD3P84022 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD3P84022 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SMAD3P84022 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD3P84022 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.23■□□□□ 0.67
SMAD3P84022 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD3P84022 LINC00602-201ENST00000629776 2065 ntBASIC19.23■□□□□ 0.67
SMAD3P84022 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMAD3P84022 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.23■□□□□ 0.67
SMAD3P84022 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SMAD3P84022 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD3P84022 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD3P84022 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.22■□□□□ 0.67
SMAD3P84022 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.22■□□□□ 0.67
SMAD3P84022 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD3P84022 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.22■□□□□ 0.67
SMAD3P84022 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMAD3P84022 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SMAD3P84022 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms