Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
YBX1P67809 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
YBX1P67809 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
YBX1P67809 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YBX1P67809 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
YBX1P67809 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
YBX1P67809 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
YBX1P67809 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
YBX1P67809 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
YBX1P67809 KRT89P-201ENST00000620027 1478 ntBASIC17.46■□□□□ 0.39
YBX1P67809 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YBX1P67809 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
YBX1P67809 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
YBX1P67809 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YBX1P67809 TSPY22P-201ENST00000427496 604 ntBASIC17.46■□□□□ 0.39
YBX1P67809 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.46■□□□□ 0.39
YBX1P67809 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.46■□□□□ 0.39
YBX1P67809 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.46■□□□□ 0.39
YBX1P67809 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
YBX1P67809 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.46■□□□□ 0.39
YBX1P67809 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.46■□□□□ 0.39
YBX1P67809 AP000550.4-202ENST00000639755 178 ntBASIC17.46■□□□□ 0.39
YBX1P67809 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.46■□□□□ 0.39
YBX1P67809 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
YBX1P67809 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
YBX1P67809 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YBX1P67809 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
YBX1P67809 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.46■□□□□ 0.39
YBX1P67809 AC141586.5-201ENST00000624546 2050 ntBASIC17.46■□□□□ 0.39
YBX1P67809 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.46■□□□□ 0.38
YBX1P67809 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.45■□□□□ 0.38
YBX1P67809 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
YBX1P67809 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.45■□□□□ 0.38
YBX1P67809 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
YBX1P67809 AL353692.3-201ENST00000407031 1396 ntBASIC17.45■□□□□ 0.38
YBX1P67809 AC016734.2-201ENST00000624325 1377 ntBASIC17.45■□□□□ 0.38
YBX1P67809 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
YBX1P67809 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
YBX1P67809 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.45■□□□□ 0.38
YBX1P67809 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.45■□□□□ 0.38
YBX1P67809 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.45■□□□□ 0.38
YBX1P67809 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.45■□□□□ 0.38
YBX1P67809 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.45■□□□□ 0.38
YBX1P67809 GPR32P1-201ENST00000601788 811 ntBASIC17.45■□□□□ 0.38
YBX1P67809 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.45■□□□□ 0.38
YBX1P67809 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 FLJ13224-201ENST00000313737 1514 ntBASIC17.45■□□□□ 0.38
YBX1P67809 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.45■□□□□ 0.38
YBX1P67809 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
YBX1P67809 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.45■□□□□ 0.38
YBX1P67809 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
YBX1P67809 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
YBX1P67809 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
YBX1P67809 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.44■□□□□ 0.38
YBX1P67809 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
YBX1P67809 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
YBX1P67809 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.44■□□□□ 0.38
YBX1P67809 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.44■□□□□ 0.38
YBX1P67809 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.44■□□□□ 0.38
YBX1P67809 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
YBX1P67809 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.44■□□□□ 0.38
YBX1P67809 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
YBX1P67809 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
YBX1P67809 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
YBX1P67809 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
YBX1P67809 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
YBX1P67809 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.44■□□□□ 0.38
YBX1P67809 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
YBX1P67809 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
YBX1P67809 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms