Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDC42P60953 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.4■□□□□ 0.22
CDC42P60953 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDC42P60953 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.4■□□□□ 0.22
CDC42P60953 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.4■□□□□ 0.22
CDC42P60953 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CDC42P60953 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.4■□□□□ 0.22
CDC42P60953 KRT8P7-201ENST00000533003 1432 ntBASIC16.4■□□□□ 0.22
CDC42P60953 HOXB1-202ENST00000577092 1414 ntBASIC16.4■□□□□ 0.22
CDC42P60953 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDC42P60953 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDC42P60953 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.4■□□□□ 0.22
CDC42P60953 B3GAT3P1-201ENST00000471720 806 ntBASIC16.4■□□□□ 0.22
CDC42P60953 AC011506.1-201ENST00000474329 610 ntBASIC16.4■□□□□ 0.22
CDC42P60953 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.4■□□□□ 0.22
CDC42P60953 DUTP2-201ENST00000519164 463 ntBASIC16.4■□□□□ 0.22
CDC42P60953 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.4■□□□□ 0.22
CDC42P60953 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.4■□□□□ 0.22
CDC42P60953 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CDC42P60953 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.4■□□□□ 0.22
CDC42P60953 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CDC42P60953 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDC42P60953 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.4■□□□□ 0.22
CDC42P60953 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDC42P60953 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.4■□□□□ 0.22
CDC42P60953 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.39■□□□□ 0.22
CDC42P60953 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.39■□□□□ 0.21
CDC42P60953 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42P60953 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42P60953 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42P60953 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42P60953 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42P60953 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CDC42P60953 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.39■□□□□ 0.21
CDC42P60953 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42P60953 ID1-201ENST00000376105 1233 ntBASIC16.39■□□□□ 0.21
CDC42P60953 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.39■□□□□ 0.21
CDC42P60953 AL355802.2-201ENST00000402069 882 ntBASIC16.39■□□□□ 0.21
CDC42P60953 HLA-L-209ENST00000420110 1011 ntBASIC16.39■□□□□ 0.21
CDC42P60953 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.39■□□□□ 0.21
CDC42P60953 AP000692.2-201ENST00000608391 879 ntBASIC16.39■□□□□ 0.21
CDC42P60953 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDC42P60953 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42P60953 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDC42P60953 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42P60953 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42P60953 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42P60953 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42P60953 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CDC42P60953 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDC42P60953 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.38■□□□□ 0.21
CDC42P60953 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.38■□□□□ 0.21
CDC42P60953 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.38■□□□□ 0.21
CDC42P60953 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CDC42P60953 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 FSCN1P1-201ENST00000568912 1481 ntBASIC16.38■□□□□ 0.21
CDC42P60953 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDC42P60953 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDC42P60953 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.38■□□□□ 0.21
CDC42P60953 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CDC42P60953 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.38■□□□□ 0.21
CDC42P60953 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.38■□□□□ 0.21
CDC42P60953 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDC42P60953 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.38■□□□□ 0.21
CDC42P60953 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.37■□□□□ 0.21
CDC42P60953 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.37■□□□□ 0.21
CDC42P60953 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC42P60953 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDC42P60953 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC42P60953 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC42P60953 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC42P60953 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDC42P60953 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CDC42P60953 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms