Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 KRT18P31-201ENST00000506277 1292 ntBASIC18.97■□□□□ 0.63
CACNA2D1P54289 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA2D1P54289 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA2D1P54289 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 AL390961.4-201ENST00000623958 2535 ntBASIC18.97■□□□□ 0.63
CACNA2D1P54289 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CACNA2D1P54289 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA2D1P54289 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA2D1P54289 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.96■□□□□ 0.63
CACNA2D1P54289 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA2D1P54289 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CACNA2D1P54289 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.96■□□□□ 0.63
CACNA2D1P54289 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA2D1P54289 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.96■□□□□ 0.63
CACNA2D1P54289 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA2D1P54289 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA2D1P54289 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA2D1P54289 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.96■□□□□ 0.63
CACNA2D1P54289 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CACNA2D1P54289 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.96■□□□□ 0.63
CACNA2D1P54289 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.96■□□□□ 0.63
CACNA2D1P54289 MINOS1P3-201ENST00000457048 203 ntBASIC18.96■□□□□ 0.63
CACNA2D1P54289 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CACNA2D1P54289 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.96■□□□□ 0.63
CACNA2D1P54289 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.96■□□□□ 0.63
CACNA2D1P54289 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA2D1P54289 IFNL4P1-201ENST00000607083 540 ntBASIC18.96■□□□□ 0.63
CACNA2D1P54289 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA2D1P54289 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA2D1P54289 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.96■□□□□ 0.63
CACNA2D1P54289 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA2D1P54289 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CACNA2D1P54289 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA2D1P54289 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA2D1P54289 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CACNA2D1P54289 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.96■□□□□ 0.63
CACNA2D1P54289 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 KRT8P47-201ENST00000604727 1398 ntBASIC18.95■□□□□ 0.62
CACNA2D1P54289 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.95■□□□□ 0.62
CACNA2D1P54289 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CACNA2D1P54289 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CACNA2D1P54289 NUS1P2-201ENST00000417358 873 ntBASIC18.95■□□□□ 0.62
CACNA2D1P54289 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.95■□□□□ 0.62
CACNA2D1P54289 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.95■□□□□ 0.62
CACNA2D1P54289 AL138831.2-201ENST00000606564 490 ntBASIC18.95■□□□□ 0.62
CACNA2D1P54289 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.95■□□□□ 0.62
CACNA2D1P54289 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.95■□□□□ 0.62
CACNA2D1P54289 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.95■□□□□ 0.62
CACNA2D1P54289 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.95■□□□□ 0.62
CACNA2D1P54289 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CACNA2D1P54289 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNA2D1P54289 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.94■□□□□ 0.62
CACNA2D1P54289 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNA2D1P54289 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CACNA2D1P54289 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.94■□□□□ 0.62
CACNA2D1P54289 RN7SL510P-201ENST00000581311 263 ntBASIC18.94■□□□□ 0.62
CACNA2D1P54289 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.94■□□□□ 0.62
CACNA2D1P54289 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CACNA2D1P54289 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CACNA2D1P54289 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.94■□□□□ 0.62
CACNA2D1P54289 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.94■□□□□ 0.62
CACNA2D1P54289 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
CACNA2D1P54289 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CACNA2D1P54289 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms