Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LBX1P52954 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
LBX1P52954 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.06■□□□□ 0.8
LBX1P52954 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LBX1P52954 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.06■□□□□ 0.8
LBX1P52954 FAM86MP-201ENST00000340703 885 ntBASIC20.06■□□□□ 0.8
LBX1P52954 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LBX1P52954 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LBX1P52954 AC112492.5-201ENST00000421897 457 ntBASIC20.06■□□□□ 0.8
LBX1P52954 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.06■□□□□ 0.8
LBX1P52954 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.06■□□□□ 0.8
LBX1P52954 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LBX1P52954 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.06■□□□□ 0.8
LBX1P52954 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.06■□□□□ 0.8
LBX1P52954 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LBX1P52954 FP475955.4-201ENST00000623131 1990 ntBASIC20.06■□□□□ 0.8
LBX1P52954 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.06■□□□□ 0.8
LBX1P52954 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.06■□□□□ 0.8
LBX1P52954 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LBX1P52954 SIRPAP1-201ENST00000448467 1770 ntBASIC20.06■□□□□ 0.8
LBX1P52954 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LBX1P52954 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.05■□□□□ 0.8
LBX1P52954 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LBX1P52954 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LBX1P52954 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LBX1P52954 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.05■□□□□ 0.8
LBX1P52954 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LBX1P52954 INE1-201ENST00000456273 945 ntBASIC20.05■□□□□ 0.8
LBX1P52954 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LBX1P52954 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LBX1P52954 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.05■□□□□ 0.8
LBX1P52954 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.05■□□□□ 0.8
LBX1P52954 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.05■□□□□ 0.8
LBX1P52954 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.05■□□□□ 0.8
LBX1P52954 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LBX1P52954 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LBX1P52954 REXO1L6P-201ENST00000603433 1515 ntBASIC20.05■□□□□ 0.8
LBX1P52954 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.05■□□□□ 0.8
LBX1P52954 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LBX1P52954 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LBX1P52954 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LBX1P52954 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LBX1P52954 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.05■□□□□ 0.8
LBX1P52954 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.05■□□□□ 0.8
LBX1P52954 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LBX1P52954 PI4KAP1-204ENST00000612579 1703 ntBASIC20.05■□□□□ 0.8
LBX1P52954 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LBX1P52954 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LBX1P52954 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LBX1P52954 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LBX1P52954 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LBX1P52954 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.04■□□□□ 0.8
LBX1P52954 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LBX1P52954 KLF4P1-201ENST00000412782 1185 ntBASIC20.04■□□□□ 0.8
LBX1P52954 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
LBX1P52954 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
LBX1P52954 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.04■□□□□ 0.8
LBX1P52954 MIR6080-201ENST00000617359 66 ntBASIC20.04■□□□□ 0.8
LBX1P52954 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LBX1P52954 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.04■□□□□ 0.8
LBX1P52954 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LBX1P52954 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LBX1P52954 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LBX1P52954 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LBX1P52954 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.03■□□□□ 0.8
LBX1P52954 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LBX1P52954 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.03■□□□□ 0.8
LBX1P52954 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.03■□□□□ 0.8
LBX1P52954 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.03■□□□□ 0.8
LBX1P52954 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LBX1P52954 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LBX1P52954 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LBX1P52954 AC098614.1-201ENST00000368528 745 ntBASIC20.03■□□□□ 0.8
LBX1P52954 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LBX1P52954 BCYRN1-201ENST00000418539 200 ntBASIC20.03■□□□□ 0.8
LBX1P52954 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
LBX1P52954 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LBX1P52954 AC022210.1-201ENST00000449856 793 ntBASIC20.03■□□□□ 0.8
LBX1P52954 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.03■□□□□ 0.8
LBX1P52954 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.03■□□□□ 0.8
LBX1P52954 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.03■□□□□ 0.8
LBX1P52954 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.03■□□□□ 0.8
LBX1P52954 RAB43P1-201ENST00000561790 589 ntBASIC20.03■□□□□ 0.8
LBX1P52954 AL135744.1-201ENST00000565098 629 ntBASIC20.03■□□□□ 0.8
LBX1P52954 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.03■□□□□ 0.8
LBX1P52954 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LBX1P52954 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.03■□□□□ 0.8
LBX1P52954 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LBX1P52954 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LBX1P52954 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LBX1P52954 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LBX1P52954 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LBX1P52954 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LBX1P52954 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LBX1P52954 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LBX1P52954 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
LBX1P52954 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.02■□□□□ 0.8
LBX1P52954 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LBX1P52954 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.02■□□□□ 0.8
LBX1P52954 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms