Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CENPFP49454 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CENPFP49454 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.07■□□□□ 0.8
CENPFP49454 IGHV3-65-201ENST00000523210 341 ntBASIC20.07■□□□□ 0.8
CENPFP49454 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.07■□□□□ 0.8
CENPFP49454 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
CENPFP49454 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CENPFP49454 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.07■□□□□ 0.8
CENPFP49454 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.07■□□□□ 0.8
CENPFP49454 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.06■□□□□ 0.8
CENPFP49454 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.06■□□□□ 0.8
CENPFP49454 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CENPFP49454 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CENPFP49454 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.06■□□□□ 0.8
CENPFP49454 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CENPFP49454 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CENPFP49454 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.06■□□□□ 0.8
CENPFP49454 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CENPFP49454 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CENPFP49454 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.06■□□□□ 0.8
CENPFP49454 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.06■□□□□ 0.8
CENPFP49454 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.06■□□□□ 0.8
CENPFP49454 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CENPFP49454 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.06■□□□□ 0.8
CENPFP49454 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.06■□□□□ 0.8
CENPFP49454 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.06■□□□□ 0.8
CENPFP49454 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.06■□□□□ 0.8
CENPFP49454 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.06■□□□□ 0.8
CENPFP49454 ESPNP-201ENST00000270691 2015 ntBASIC20.06■□□□□ 0.8
CENPFP49454 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CENPFP49454 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CENPFP49454 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CENPFP49454 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CENPFP49454 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.06■□□□□ 0.8
CENPFP49454 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.06■□□□□ 0.8
CENPFP49454 AC008761.3-201ENST00000624803 892 ntBASIC20.06■□□□□ 0.8
CENPFP49454 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.06■□□□□ 0.8
CENPFP49454 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CENPFP49454 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CENPFP49454 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.05■□□□□ 0.8
CENPFP49454 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CENPFP49454 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CENPFP49454 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CENPFP49454 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CENPFP49454 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.05■□□□□ 0.8
CENPFP49454 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CENPFP49454 AC092919.2-201ENST00000623631 1645 ntBASIC20.05■□□□□ 0.8
CENPFP49454 AL049757.1-201ENST00000616842 1596 ntBASIC20.05■□□□□ 0.8
CENPFP49454 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.05■□□□□ 0.8
CENPFP49454 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.05■□□□□ 0.8
CENPFP49454 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CENPFP49454 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.05■□□□□ 0.8
CENPFP49454 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.05■□□□□ 0.8
CENPFP49454 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.05■□□□□ 0.8
CENPFP49454 DUX4L27-201ENST00000554796 1261 ntBASIC20.05■□□□□ 0.8
CENPFP49454 AC051619.7-201ENST00000568314 623 ntBASIC20.05■□□□□ 0.8
CENPFP49454 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
CENPFP49454 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.05■□□□□ 0.8
CENPFP49454 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CENPFP49454 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.04■□□□□ 0.8
CENPFP49454 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CENPFP49454 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.04■□□□□ 0.8
CENPFP49454 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CENPFP49454 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CENPFP49454 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.04■□□□□ 0.8
CENPFP49454 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CENPFP49454 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CENPFP49454 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CENPFP49454 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.04■□□□□ 0.8
CENPFP49454 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.04■□□□□ 0.8
CENPFP49454 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.04■□□□□ 0.8
CENPFP49454 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.04■□□□□ 0.8
CENPFP49454 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CENPFP49454 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CENPFP49454 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.04■□□□□ 0.8
CENPFP49454 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.04■□□□□ 0.8
CENPFP49454 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CENPFP49454 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CENPFP49454 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.04■□□□□ 0.8
CENPFP49454 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.04■□□□□ 0.8
CENPFP49454 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CENPFP49454 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CENPFP49454 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CENPFP49454 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CENPFP49454 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CENPFP49454 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CENPFP49454 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CENPFP49454 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CENPFP49454 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CENPFP49454 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CENPFP49454 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CENPFP49454 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CENPFP49454 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CENPFP49454 BCAR1-209ENST00000546196 1340 ntBASIC20.03■□□□□ 0.8
CENPFP49454 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CENPFP49454 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CENPFP49454 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CENPFP49454 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.03■□□□□ 0.8
CENPFP49454 NCF1C-201ENST00000438382 1427 ntBASIC20.03■□□□□ 0.8
CENPFP49454 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms