Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SLC9A3P48764 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SLC9A3P48764 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC9A3P48764 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC9A3P48764 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC9A3P48764 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC9A3P48764 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC9A3P48764 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 AL512604.3-201ENST00000569583 964 ntBASIC16.46■□□□□ 0.23
SLC9A3P48764 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 TMEM191A-211ENST00000637163 1067 ntBASIC16.46■□□□□ 0.23
SLC9A3P48764 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC9A3P48764 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC9A3P48764 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
SLC9A3P48764 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.46■□□□□ 0.22
SLC9A3P48764 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.46■□□□□ 0.22
SLC9A3P48764 AC108860.2-201ENST00000562760 2183 ntBASIC16.45■□□□□ 0.22
SLC9A3P48764 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SLC9A3P48764 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC9A3P48764 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 KRT18P55-202ENST00000578578 1546 ntBASIC16.45■□□□□ 0.22
SLC9A3P48764 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 LINC01126-201ENST00000623515 1646 ntBASIC16.45■□□□□ 0.22
SLC9A3P48764 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SLC9A3P48764 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC9A3P48764 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
SLC9A3P48764 SNORA78-201ENST00000459373 127 ntBASIC16.45■□□□□ 0.22
SLC9A3P48764 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC9A3P48764 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC9A3P48764 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC9A3P48764 AC008687.5-201ENST00000593746 558 ntBASIC16.45■□□□□ 0.22
SLC9A3P48764 AC010240.3-201ENST00000607688 395 ntBASIC16.45■□□□□ 0.22
SLC9A3P48764 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 AL024508.2-201ENST00000607749 1894 ntBASIC16.45■□□□□ 0.22
SLC9A3P48764 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC9A3P48764 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC9A3P48764 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC9A3P48764 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC9A3P48764 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC9A3P48764 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC9A3P48764 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SLC9A3P48764 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC9A3P48764 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SLC9A3P48764 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SLC9A3P48764 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC9A3P48764 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC9A3P48764 AL355075.4-201ENST00000554988 638 ntBASIC16.44■□□□□ 0.22
SLC9A3P48764 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC9A3P48764 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC9A3P48764 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC9A3P48764 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
SLC9A3P48764 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC9A3P48764 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms