Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.97■□□□□ 0.15
CSNK1A1P48729 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.97■□□□□ 0.15
CSNK1A1P48729 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.97■□□□□ 0.15
CSNK1A1P48729 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1A1P48729 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1A1P48729 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CSNK1A1P48729 GPR32P1-201ENST00000601788 811 ntBASIC15.97■□□□□ 0.15
CSNK1A1P48729 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.97■□□□□ 0.15
CSNK1A1P48729 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.97■□□□□ 0.15
CSNK1A1P48729 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CSNK1A1P48729 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1A1P48729 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1A1P48729 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CSNK1A1P48729 KRT18P55-202ENST00000578578 1546 ntBASIC15.97■□□□□ 0.15
CSNK1A1P48729 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1A1P48729 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.97■□□□□ 0.15
CSNK1A1P48729 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CSNK1A1P48729 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.97■□□□□ 0.15
CSNK1A1P48729 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1A1P48729 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1A1P48729 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1A1P48729 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSNK1A1P48729 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1A1P48729 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CSNK1A1P48729 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1A1P48729 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.96■□□□□ 0.15
CSNK1A1P48729 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.96■□□□□ 0.15
CSNK1A1P48729 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CSNK1A1P48729 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.96■□□□□ 0.15
CSNK1A1P48729 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1A1P48729 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1A1P48729 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CSNK1A1P48729 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1A1P48729 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.96■□□□□ 0.15
CSNK1A1P48729 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.96■□□□□ 0.15
CSNK1A1P48729 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.96■□□□□ 0.15
CSNK1A1P48729 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1A1P48729 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1A1P48729 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1A1P48729 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1A1P48729 AL353692.3-201ENST00000407031 1396 ntBASIC15.96■□□□□ 0.15
CSNK1A1P48729 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.96■□□□□ 0.15
CSNK1A1P48729 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.96■□□□□ 0.15
CSNK1A1P48729 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSNK1A1P48729 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CSNK1A1P48729 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.96■□□□□ 0.14
CSNK1A1P48729 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CSNK1A1P48729 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CSNK1A1P48729 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 AL133373.2-201ENST00000623187 2828 ntBASIC15.95■□□□□ 0.14
CSNK1A1P48729 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 AL645929.1-201ENST00000420084 975 ntBASIC15.95■□□□□ 0.14
CSNK1A1P48729 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 SPDYE13P-201ENST00000445314 798 ntBASIC15.95■□□□□ 0.14
CSNK1A1P48729 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 AC005332.3-201ENST00000589904 676 ntBASIC15.95■□□□□ 0.14
CSNK1A1P48729 NTF6B-201ENST00000591913 560 ntBASIC15.95■□□□□ 0.14
CSNK1A1P48729 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 AC009154.2-201ENST00000621177 724 ntBASIC15.95■□□□□ 0.14
CSNK1A1P48729 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSNK1A1P48729 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CSNK1A1P48729 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSNK1A1P48729 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.94■□□□□ 0.14
CSNK1A1P48729 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms