Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF4P48230 AL512356.2-201ENST00000546955 174 ntBASIC20.28■□□□□ 0.84
TM4SF4P48230 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.28■□□□□ 0.84
TM4SF4P48230 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF4P48230 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.28■□□□□ 0.84
TM4SF4P48230 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF4P48230 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TM4SF4P48230 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF4P48230 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TM4SF4P48230 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TM4SF4P48230 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF4P48230 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF4P48230 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF4P48230 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.27■□□□□ 0.84
TM4SF4P48230 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.27■□□□□ 0.84
TM4SF4P48230 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.27■□□□□ 0.84
TM4SF4P48230 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF4P48230 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF4P48230 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.27■□□□□ 0.84
TM4SF4P48230 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF4P48230 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.27■□□□□ 0.84
TM4SF4P48230 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF4P48230 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.27■□□□□ 0.84
TM4SF4P48230 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.27■□□□□ 0.84
TM4SF4P48230 FAM185BP-201ENST00000443595 716 ntBASIC20.27■□□□□ 0.84
TM4SF4P48230 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF4P48230 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TM4SF4P48230 AC026120.1-201ENST00000611536 926 ntBASIC20.27■□□□□ 0.84
TM4SF4P48230 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF4P48230 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TM4SF4P48230 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TM4SF4P48230 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TM4SF4P48230 AC018445.3-201ENST00000624177 1945 ntBASIC20.27■□□□□ 0.84
TM4SF4P48230 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TM4SF4P48230 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TM4SF4P48230 AC092919.2-201ENST00000623631 1645 ntBASIC20.27■□□□□ 0.83
TM4SF4P48230 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
TM4SF4P48230 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TM4SF4P48230 AL049812.1-201ENST00000432563 2267 ntBASIC20.27■□□□□ 0.83
TM4SF4P48230 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF4P48230 AC097637.2-201ENST00000624096 1997 ntBASIC20.26■□□□□ 0.83
TM4SF4P48230 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.26■□□□□ 0.83
TM4SF4P48230 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF4P48230 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TM4SF4P48230 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF4P48230 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.26■□□□□ 0.83
TM4SF4P48230 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF4P48230 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF4P48230 CNN2P2-201ENST00000443536 909 ntBASIC20.26■□□□□ 0.83
TM4SF4P48230 CNN2P3-201ENST00000450201 906 ntBASIC20.26■□□□□ 0.83
TM4SF4P48230 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.26■□□□□ 0.83
TM4SF4P48230 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TM4SF4P48230 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.26■□□□□ 0.83
TM4SF4P48230 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.26■□□□□ 0.83
TM4SF4P48230 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.26■□□□□ 0.83
TM4SF4P48230 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.26■□□□□ 0.83
TM4SF4P48230 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF4P48230 AC019129.2-201ENST00000609837 1235 ntBASIC20.26■□□□□ 0.83
TM4SF4P48230 AL136317.3-201ENST00000618497 906 ntBASIC20.26■□□□□ 0.83
TM4SF4P48230 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.26■□□□□ 0.83
TM4SF4P48230 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TM4SF4P48230 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF4P48230 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
TM4SF4P48230 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TM4SF4P48230 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.26■□□□□ 0.83
TM4SF4P48230 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.26■□□□□ 0.83
TM4SF4P48230 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TM4SF4P48230 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TM4SF4P48230 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TM4SF4P48230 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TM4SF4P48230 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.25■□□□□ 0.83
TM4SF4P48230 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TM4SF4P48230 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.25■□□□□ 0.83
TM4SF4P48230 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
TM4SF4P48230 AC007274.1-201ENST00000439805 662 ntBASIC20.25■□□□□ 0.83
TM4SF4P48230 FAM207CP-201ENST00000443486 507 ntBASIC20.25■□□□□ 0.83
TM4SF4P48230 TIMM8BP1-201ENST00000452384 211 ntBASIC20.25■□□□□ 0.83
TM4SF4P48230 AC069335.1-201ENST00000489972 472 ntBASIC20.25■□□□□ 0.83
TM4SF4P48230 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.25■□□□□ 0.83
TM4SF4P48230 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.25■□□□□ 0.83
TM4SF4P48230 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.25■□□□□ 0.83
TM4SF4P48230 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.25■□□□□ 0.83
TM4SF4P48230 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.25■□□□□ 0.83
TM4SF4P48230 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM4SF4P48230 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TM4SF4P48230 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms